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Files patterns

f|*.json

Defined in file: brainvisa/types/builtin.py

Used in the following processes

Automatic bounding boxes detection
Average Silhouette Width
Basic Mixture Fitting
Brain Parcellation (EM)
Brainvisa Show Text
compare two transformations
Complete CT acquisition data
Complete PET acquisition data
Complete T1 MRI acquisition data
compute brain Volume data (MNI space)
compute Grey / White / CSF / Skull / Scalp Mask
compute histogram analysis Generic
compute intensity normalization
Compute Statistic on Volume ( label or mask )
Constellation Optimal Clustering
Copy data between databases
Copy Referential
Create PET group by increasing SUVr
Create PET subject group
Create Ref for Segmentation Quality Control "Notation"
Create Subject group
CZI only: Automatic extract meta-data bounding boxes
Draw bounding boxes
Extract subvolume
GeneralImport
Histological scan spatial reorganization
Histological slices extraction
Import Ecat PET Dynamic & T1MRI
Import FSL Connectomes.
Import new assessment (dicom)
Import Reference dicom
Import Vois
ImportData
Intensity normalisation PET Pipeline (spm12)
Intensity normalisation PET Pipeline (spm8)
Manage Subject group
Manual: Edit bounding box
Manual: Extract bounding boxes
Measure the offset from SPM realign
Merge bounding box files
Müller-Gärtner
New Referential
Nuclear Imaging quality check
Optimal PiB Reference Region
pet pipeline without MRI (spm12)
pet pipeline without MRI (spm8)
Phantom plot results
PVC pipeline
QC rawdata PET
QC rawdata SPECT
QC recons SPECT
Quality control for Pet with MRI Pipeline
Quality control for Pet without MRI Pipeline
Quantification
ROI based analysis PET Pipeline (spm12)
ROI based analysis PET Pipeline (spm8)
Segmentation Quality Control "Notation"
Simple ROI Editor
Simplified Morphologist 2015
SPM quantification
Study definition manager
Sulci Deep CNN training
Sulci graph morphometry by subject
Sulci recognition with Deep CNN
SUV Calculation
Validity Indexes
Volbrain processings
Write a different measures in csv file
{Importer} Histology scan
{Viewer} Mixture

Associated types

4D Volume
Any Type
atlas label volume translation
available volume of interest
Bounding Box Info
Clustering Silhouette
Common Dicom tags
coregister quality control
CT acquisition data
Device model Dicom tags
Dicom tags
histogram analysis data
Histology scan bounding boxes
Manufacturer Dicom tags
Modality Dicom tags
Nuclear isotope data
P:Basic Gaussian Mixture Parameters
P:Complete Gaussian Mixture Parameters
P:Gaussian Mixture Parameters
PET acquisition data
PET parametric data
PET spatial normalisation quality control
PET transfer data
quantitative analysis data
quantitative analysis label volume translation
Raw T1 MRI acquisition data
Rawdata QC MN template
rawdata quality control
Reference Dicom tags
reference region mask translation
segmentation quality control
SPECT acquisition data
SPECT phantom statistics
SPECT Phantom Theoric Values
SPECT quantification ROI translation
SPECT rawdata quality control
SPECT reconstruction quality control
SPECT ROI analysis results
SPM labelled filtered image translation
Study definition data
Subject Group
Sulci groups list
T1 MRI brain labels data
T1 MRI intracranial labels translation
Text file